Transcript: ENSDART00000131832.3 si:ch211-271e10.6-201

Description

si:ch211-271e10.6 [Source:ZFIN;Acc:ZDB-GENE-060526-149]

Location

Chromosome 5: 38,631,119-38,633,105 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 167 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093763.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000162215.2	si:ch211-271e10.6-203	940	190aa	ENSDARP00000136185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000131832.3	si:ch211-271e10.6-201	795	131aa	ENSDARP00000114010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147280.3	si:ch211-271e10.6-202	544	115aa	ENSDARP00000121569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 795 bps, Translation length: 131 residues

Version

ENSDART00000131832.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000131832.3 si:ch211-271e10.6-201

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Transcript: ENSDART00000131832.3 si:ch211-271e10.6-201

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