Transcript: ENSDART00000131782.3 sh2d5-202

Description

SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]

Location

Chromosome 11: 37,638,980-37,650,966 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 466 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014324.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184291.1	sh2d5-207	3809	296aa	ENSDARP00000156878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EN4	-
ENSDART00000186384.1	sh2d5-208	3140	296aa	ENSDARP00000148702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EN4	-
ENSDART00000131782.3	sh2d5-202	1979	410aa	ENSDARP00000116139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5B0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140502.2	sh2d5-204	530	149aa	ENSDARP00000117449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000003211.10	sh2d5-201	2027	296aa	ENSDARP00000124960.1	Nonsense mediated decay	Q58EN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000141234.3	sh2d5-205	923	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140293.2	sh2d5-203	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148024.2	sh2d5-206	308	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,979 bps, Translation length: 410 residues

Version

ENSDART00000131782.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000131782.3 sh2d5-202

Summary

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Transcript: ENSDART00000131782.3 sh2d5-202

Summary

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