Transcript: ENSDART00000131777.2 cuedc1a-202

Description

CUE domain containing 1a [Source:NCBI gene (formerly Entrezgene);Acc:768297]

Location

Chromosome 10: 37,145,007-37,167,451 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 484 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068716.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131777.2	cuedc1a-202	2322	381aa	ENSDARP00000116146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NBI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000114909.4	cuedc1a-201	2331	380aa	ENSDARP00000100672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000141642.2	cuedc1a-203	2231	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,322 bps, Translation length: 381 residues

Version

ENSDART00000131777.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000131777.2 cuedc1a-202

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Transcript: ENSDART00000131777.2 cuedc1a-202

Summary

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