Transcript: ENSDART00000131743.3 rex1bd-202

Description

required for excision 1-B domain containing [Source:ZFIN;Acc:ZDB-GENE-081031-40]

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 252 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112839.4	rex1bd-201	1083	170aa	ENSDARP00000102057.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JL57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131743.3	rex1bd-202	840	170aa	ENSDARP00000113162.1	Nonsense mediated decay	B8JL57	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 840 bps, Translation length: 170 residues

Version

ENSDART00000131743.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.