Transcript: ENSDART00000131640.2 tiam1a-202

Description

TIAM Rac1 associated GEF 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]

Gene Synonyms

tiam1

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 489 variant alleles and maps to 36 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110751.5	tiam1a-201	7107	1621aa	ENSDARP00000101604.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143978.3	tiam1a-204	6328	1572aa	ENSDARP00000112941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131640.2	tiam1a-202	800	260aa	ENSDARP00000115547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138262.2	tiam1a-203	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 800 bps, Translation length: 260 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000131640.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.