Transcript: ENSDART00000131606.3 myom1a-201

Description

myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]

Gene Synonyms

im:7139709, myom1, wu:fc19g07, wu:fj97c07

Location

Chromosome 2: 30,955,780-30,958,848 forward strand.

About this transcript

This transcript has 3 exons, is associated with 224 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061249.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137012.4	myom1a-203	5891	1483aa	ENSDARP00000117418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NUG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149923.2	myom1a-205	748	249aa	ENSDARP00000123955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149721.2	myom1a-204	924	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132450.3	myom1a-202	415	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000131606.3	myom1a-201	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 614 bps,

Version

ENSDART00000131606.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000131606.3 myom1a-201

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Transcript: ENSDART00000131606.3 myom1a-201

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