Transcript: ENSDART00000131506.3 cdh6-202

Description

cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]

Location

About this transcript

This transcript has 11 exons, is annotated with 55 domains and features, is associated with 676 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131506.3	cdh6-202	4217	794aa	ENSDARP00000117877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5WN09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000013638.9	cdh6-201	3432	794aa	ENSDARP00000025811.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5WN09	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,217 bps, Translation length: 794 residues

Version

ENSDART00000131506.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.