Transcript: ENSDART00000131505.3 ykt6-202

Description

YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI gene;Acc:394067]

Gene Synonyms

zgc:55536

Location

Chromosome 10: 2,841,205-2,850,936 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 324 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038308.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131505.3	ykt6-202	1650	199aa	ENSDARP00000121331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q581	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000055869.4	ykt6-201	1584	198aa	ENSDARP00000055868.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAJ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000181895.1	ykt6-203	639	198aa	ENSDARP00000157654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAJ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,650 bps, Translation length: 199 residues

Version

ENSDART00000131505.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000131505.3 ykt6-202

Summary

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Transcript: ENSDART00000131505.3 ykt6-202

Summary

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