Transcript: ENSDART00000131438.2 FHOD3-201

Description

formin homology 2 domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081028-61]

Location

Chromosome 16: 18,608,978-18,652,646 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 213 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061904.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000131438.2	FHOD3-201	2542	847aa	ENSDARP00000121037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000183197.1	FHOD3-204	1261	56aa	ENSDARP00000151397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000143185.2	FHOD3-202	959	319aa	ENSDARP00000121568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000191595.1	FHOD3-205	363	120aa	ENSDARP00000156187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000134796.2	FHOD3-203	917	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,542 bps, Translation length: 847 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131438.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000131438.2 FHOD3-201

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Transcript: ENSDART00000131438.2 FHOD3-201

Summary

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