Transcript: ENSDART00000131347.2 SLC48A1-201

Description

solute carrier family 48 member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]

Location

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 8 variant alleles and maps to 175 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000029930.8	SLC48A1-202	1516	144aa	ENSDARP00000035010.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVN2 Q7T3B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131347.2	SLC48A1-201	581	106aa	ENSDARP00000118101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 581 bps, Translation length: 106 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000131347.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.