Transcript: ENSDART00000131325.2 EBP-202

Description

EBP cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]

Location

About this transcript

This transcript has 5 exons, is associated with 183 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019045.8	EBP-201	1634	232aa	ENSDARP00000007796.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183681.1	EBP-204	2548	261aa	ENSDARP00000146738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131325.2	EBP-202	781	79aa	ENSDARP00000119566.1	Nonsense mediated decay	-	-
ENSDART00000142750.2	EBP-203	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 781 bps, Translation length: 79 residues

Version

ENSDART00000131325.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.