Transcript: ENSDART00000131286.2 ch25hl3-201

Description

cholesterol 25-hydroxylase like 3 [Source:ZFIN;Acc:ZDB-GENE-180119-1]

Gene Synonyms

ch25ha

Location

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 284 variant alleles and maps to 219 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131286.2	ch25hl3-201	3869	331aa	ENSDARP00000121177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QK16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142525.3	ch25hl3-202	3027	331aa	ENSDARP00000114597.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QK16 F1QE73	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,869 bps, Translation length: 331 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A3QK16

Version

ENSDART00000131286.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.