Transcript: ENSDART00000131267.3 TSC22D1-204

Description

TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]

Location

About this transcript

This transcript has 3 exons, is annotated with 42 domains and features, is associated with 1235 variant alleles and maps to 221 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131267.3	TSC22D1-204	2896	838aa	ENSDARP00000116421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143165.3	TSC22D1-202	1688	145aa	ENSDARP00000121300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZP1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145401.2	TSC22D1-201	1059	133aa	ENSDARP00000122272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1G3	-
ENSDART00000131626.3	TSC22D1-203	827	118aa	ENSDARP00000115165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,896 bps, Translation length: 838 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131267.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.