Transcript: ENSDART00000131229.4 SLC44A5-201

Description

solute carrier family 44 member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]

Location

About this transcript

This transcript has 22 exons, is annotated with 38 domains and features, is associated with 4313 variant alleles and maps to 220 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131229.4	SLC44A5-201	2435	715aa	ENSDARP00000121140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193817.1	SLC44A5-204	1989	605aa	ENSDARP00000153870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165803.2	SLC44A5-203	1903	605aa	ENSDARP00000131459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000140823.2	SLC44A5-202	335	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 2,435 bps, Translation length: 715 residues

Version

ENSDART00000131229.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.