Transcript: ENSDART00000131218.2 AARS2-201

Description

alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]

Location

Chromosome 22: 25,554,232-25,587,189 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 35 domains and features, is associated with 759 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000107385.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131218.2	AARS2-201	3140	997aa	ENSDARP00000113382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000184440.1	AARS2-203	3391	399aa	ENSDARP00000154708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000178133.2	AARS2-202	3105	362aa	ENSDARP00000143932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1RP90	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,140 bps, Translation length: 997 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131218.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000131218.2 AARS2-201

Summary

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Transcript: ENSDART00000131218.2 AARS2-201

Summary

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