Transcript: ENSDART00000131060.3 pcsk5a-202

Description

proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]

Gene Synonyms

PCSK5/6a, pc5.1, pcsk5.1, si:dkey-267i17.1

Location

About this transcript

This transcript has 27 exons, is annotated with 63 domains and features, is associated with 732 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085314.5	pcsk5a-201	5466	1821aa	ENSDARP00000079749.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BHH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000131060.3	pcsk5a-202	3495	1093aa	ENSDARP00000104646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R175	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 3,495 bps, Translation length: 1,093 residues

Version

ENSDART00000131060.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.