Transcript: ENSDART00000131027.3 TMEM216-204

Description

transmembrane protein 216 [Source:ZFIN;Acc:ZDB-GENE-100818-1]

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131027.3	TMEM216-204	710	160aa	ENSDARP00000111752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162556.2	TMEM216-202	617	141aa	ENSDARP00000142520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000159827.2	TMEM216-203	860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000165054.2	TMEM216-201	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 710 bps, Translation length: 160 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E7EYQ9

Version

ENSDART00000131027.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]