Transcript: ENSDART00000131014.3 sept7a-202

Description

septin 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1008]

Gene Synonyms

sept7, wu:fb38h06, zgc:56383

Location

Chromosome 19: 11,331,822-11,336,782 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 180 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087647.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080762.6	sept7a-201	2469	443aa	ENSDARP00000075208.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000131014.3	sept7a-202	1407	106aa	ENSDARP00000108766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QUG1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000177875.2	sept7a-203	1359	435aa	ENSDARP00000144065.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YA64	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,407 bps, Translation length: 106 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131014.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000131014.3 sept7a-202

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Transcript: ENSDART00000131014.3 sept7a-202

Summary

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