Transcript: ENSDART00000130678.3 spam1-201

Description

sperm adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-050506-63]

Gene Synonyms

im:6902904, zgc:158668

Location

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 238 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130678.3	spam1-201	1497	441aa	ENSDARP00000105750.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F437	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187245.1	spam1-202	5719	441aa	ENSDARP00000149624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F437	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,497 bps, Translation length: 441 residues

Version

ENSDART00000130678.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.