Transcript: ENSDART00000130477.4 snai1a-202

Description

snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]

Gene Synonyms

cb643, sna-1, sna1, snail1, snail1a, zgc:109820

Location

About this transcript

This transcript has 3 exons, is annotated with 30 domains and features, is associated with 329 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130477.4	snai1a-202	1942	260aa	ENSDARP00000111412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90274	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123567.3	snai1a-201	986	251aa	ENSDARP00000111074.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGE1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,942 bps, Translation length: 260 residues

Version

ENSDART00000130477.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.