Transcript: ENSDART00000130410.3 il17rel-201

Description

interleukin 17 receptor E-like [Source:ZFIN;Acc:ZDB-GENE-120112-1]

Location

Chromosome 25: 29,474,982-29,497,002 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 4 domains and features, is associated with 843 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089131.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154857.2	il17rel-202	1388	448aa	ENSDARP00000127663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000191189.1	il17rel-203	1290	429aa	ENSDARP00000149205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q7W2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000130410.3	il17rel-201	1185	394aa	ENSDARP00000107327.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4E8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,185 bps, Translation length: 394 residues

Version

ENSDART00000130410.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000130410.3 il17rel-201

Summary

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Transcript: ENSDART00000130410.3 il17rel-201

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