Transcript: ENSDART00000130353.4 FDPS-203

Description

farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]

Location

Chromosome 16: 13,993,351-14,022,175 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 739 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040890.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000122272.4	FDPS-204	2212	356aa	ENSDARP00000111961.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184401.1	FDPS-205	4612	362aa	ENSDARP00000146210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000059928.5	FDPS-202	958	316aa	ENSDARP00000059927.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000130353.4	FDPS-203	937	312aa	ENSDARP00000105887.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142815.2	FDPS-201	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 937 bps, Translation length: 312 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000130353.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000130353.4 FDPS-203

Summary

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Transcript: ENSDART00000130353.4 FDPS-203

Summary

About Us

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