Transcript: ENSDART00000130271.4 sox7-201

Description

SRY-box transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]

Location

Chromosome 20: 19,066,596-19,078,424 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 171 variant alleles and maps to 226 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030125.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181529.1	sox7-202	5130	390aa	ENSDARP00000147155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130271.4	sox7-201	2567	390aa	ENSDARP00000108471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192086.1	sox7-203	2386	390aa	ENSDARP00000146439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,567 bps, Translation length: 390 residues

Version

ENSDART00000130271.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000130271.4 sox7-201

Summary

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Transcript: ENSDART00000130271.4 sox7-201

Summary

About Us

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