Transcript: ENSDART00000130028.4 FTO-201

Description

FTO alpha-ketoglutarate dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-061108-1]

Location

Chromosome 7: 36,111,332-36,358,303 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 5064 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044216.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130028.4	FTO-201	3353	567aa	ENSDARP00000107656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000188392.1	FTO-203	4295	580aa	ENSDARP00000145984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PKY4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000064913.6	FTO-202	851	50aa	ENSDARP00000064912.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,353 bps, Translation length: 567 residues

Version

ENSDART00000130028.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000130028.4 FTO-201

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Transcript: ENSDART00000130028.4 FTO-201

Summary

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