Transcript: ENSDART00000129941.4 si:ch1073-83m3.1-202

Description

si:ch1073-83m3.1 [Source:ZFIN;Acc:ZDB-GENE-131121-610]

Location

About this transcript

This transcript has 18 exons, is annotated with 24 domains and features, is associated with 510 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099375.5	si:ch1073-83m3.1-201	5444	1028aa	ENSDARP00000090148.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129941.4	si:ch1073-83m3.1-202	2480	726aa	ENSDARP00000109118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,480 bps, Translation length: 726 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000129941.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.