Transcript: ENSDART00000129844.3 slc12a2-201

Description

solute carrier family 12 member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 779 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169885.3	slc12a2-203	7453	1136aa	ENSDARP00000135730.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KTI4-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164647.2	slc12a2-202	3390	1120aa	ENSDARP00000131505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000129844.3	slc12a2-201	1137	271aa	ENSDARP00000105107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,137 bps, Translation length: 271 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000129844.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.