Transcript: ENSDART00000129314.4 LOXL3-201

Description

lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]

Location

About this transcript

This transcript has 15 exons, is annotated with 52 domains and features, is associated with 243 variant alleles and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129314.4	LOXL3-201	2607	807aa	ENSDARP00000109545.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4W9-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109245.4	LOXL3-203	1489	141aa	ENSDARP00000103878.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000121453.4	LOXL3-202	1274	268aa	ENSDARP00000105131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,607 bps, Translation length: 807 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B8A4W9

Version

ENSDART00000129314.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.