Transcript: ENSDART00000129009.3 vcpkmt-201

Description

valosin containing protein lysine (K) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060825-19]

Gene Synonyms

im:7159042, mettl21d, zgc:153596

Location

About this transcript

This transcript has 4 exons, is associated with 515 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153669.3	vcpkmt-203	1326	223aa	ENSDARP00000128498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129009.3	vcpkmt-201	635	128aa	ENSDARP00000108585.2	Nonsense mediated decay	E7F754	-
ENSDART00000153631.2	vcpkmt-202	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 635 bps, Translation length: 128 residues

Version

ENSDART00000129009.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.