Transcript: ENSDART00000128951.3 nkx3.3-201

Description

NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]

Location

About this transcript

This transcript has 2 exons, is annotated with 19 domains and features, is associated with 128 variant alleles and maps to 265 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128951.3	nkx3.3-201	1530	240aa	ENSDARP00000107444.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3M6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000191921.1	nkx3.3-202	452	149aa	ENSDARP00000152278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,530 bps, Translation length: 240 residues

Version

ENSDART00000128951.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.