Transcript: ENSDART00000128792.3 SMARCB1-202

Description

SWI/SNF related BAF chromatin remodeling complex subunit B1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]

Location

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 440 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049944.9	SMARCB1-201	1512	373aa	ENSDARP00000049943.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U379	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191717.1	SMARCB1-203	1469	366aa	ENSDARP00000150055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG87	-
ENSDART00000128792.3	SMARCB1-202	756	229aa	ENSDARP00000109356.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 756 bps, Translation length: 229 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000128792.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.