Transcript: ENSDART00000128748.3 washc2c-202

Description

WASH complex subunit 2C [Source:ZFIN;Acc:ZDB-GENE-060825-87]

Gene Synonyms

fam21c, wu:fb78c06, zgc:153646

Location

Chromosome 13: 18,107,495-18,122,333 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 477 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062532.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128748.3	washc2c-202	1440	401aa	ENSDARP00000109069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148125.3	washc2c-204	4446	1347aa	ENSDARP00000119265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKJ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000090475.6	washc2c-201	2840	863aa	ENSDARP00000084908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5I6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000143223.2	washc2c-203	1069	356aa	ENSDARP00000122297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,440 bps, Translation length: 401 residues

Version

ENSDART00000128748.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000128748.3 washc2c-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000128748.3 washc2c-202

Summary

About Us

Get help

Our sister sites

Follow us