Transcript: ENSDART00000128636.3 CIAO3-201

Description

nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]

Location

About this transcript

This transcript has 11 exons, is associated with 397 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089679.7	CIAO3-202	2083	477aa	ENSDARP00000084112.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128636.3	CIAO3-201	2178	59aa	ENSDARP00000111979.3	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 3, Transcript length: 2,178 bps, Translation length: 59 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000128636.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.