Transcript: ENSDART00000128613.4 RPS15A-201

Description

ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 2 variant alleles and maps to 248 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128613.4	RPS15A-201	721	130aa	ENSDARP00000108197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6Q420	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172555.2	RPS15A-203	438	130aa	ENSDARP00000134460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6Q420	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000018822.7	RPS15A-202	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 721 bps, Translation length: 130 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6Q420

Version

ENSDART00000128613.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.