Transcript: ENSDART00000127962.4 stox1-202

Description

storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]

Gene Synonyms

sb:cb624, zgc:174575

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 797 variant alleles and maps to 219 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127962.4	stox1-202	3596	967aa	ENSDARP00000105242.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WB79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090712.5	stox1-201	3565	967aa	ENSDARP00000085145.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WB79	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,596 bps, Translation length: 967 residues

Version

ENSDART00000127962.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.