Transcript: ENSDART00000127955.4 LYSMD2-201

Description

LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]

Gene Synonyms

zgc:91941

Location

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 105 variant alleles and maps to 331 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127955.4	LYSMD2-201	1380	208aa	ENSDARP00000111919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DEF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171303.2	LYSMD2-203	1045	88aa	ENSDARP00000135111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183174.1	LYSMD2-202	885	215aa	ENSDARP00000146072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,380 bps, Translation length: 208 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DEF4

Version

ENSDART00000127955.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.