Transcript: ENSDART00000127938.3 HSPD1-202

Description

heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]

Location

About this transcript

This transcript has 11 exons, is annotated with 27 domains and features, is associated with 489 variant alleles and maps to 180 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078596.6	HSPD1-201	2796	575aa	ENSDARP00000073057.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127938.3	HSPD1-202	2249	575aa	ENSDARP00000107955.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803B0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,249 bps, Translation length: 575 residues

Version

ENSDART00000127938.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.