Transcript: ENSDART00000127919.3 SSH1-201

Description

slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]

Location

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 326 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000153643.3	SSH1-202	2016	671aa	ENSDARP00000129745.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127919.3	SSH1-201	1280	427aa	ENSDARP00000105370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,280 bps, Translation length: 427 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000127919.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.