Transcript: ENSDART00000127845.3 SSH2-202

Description

slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]

Location

Chromosome 15: 28,545,143-28,569,786 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 33 domains and features, is associated with 287 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000088440.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156049.2	SSH2-201	4114	1168aa	ENSDARP00000129137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000127845.3	SSH2-202	8257	1175aa	ENSDARP00000112052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH10	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000186196.1	SSH2-203	7813	1125aa	ENSDARP00000153165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 8,257 bps, Translation length: 1,175 residues

Version

ENSDART00000127845.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000127845.3 SSH2-202

Summary

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Transcript: ENSDART00000127845.3 SSH2-202

Summary

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