Transcript: ENSDART00000127843.3 PPM1A-201

Description

protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 154 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076527.7	PPM1A-202	1906	384aa	ENSDARP00000070999.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000185503.1	PPM1A-203	5108	392aa	ENSDARP00000152770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q9J2	-
ENSDART00000178460.2	PPM1A-204	1788	390aa	ENSDARP00000143657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y912	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164590.2	PPM1A-205	1764	382aa	ENSDARP00000140697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYF8	-
ENSDART00000127843.3	PPM1A-201	887	218aa	ENSDARP00000105749.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 887 bps, Translation length: 218 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000127843.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.