Transcript: ENSDART00000127787.3 SPNS3-201

Description

SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) [Source:ZFIN;Acc:ZDB-GENE-060531-7]

Location

Chromosome 5: 30,959,759-30,978,381 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 46 domains and features, is associated with 689 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035459.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051392.7	SPNS3-202	5100	498aa	ENSDARP00000051391.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CER7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182367.1	SPNS3-203	2076	498aa	ENSDARP00000145247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CER7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127787.3	SPNS3-201	1902	498aa	ENSDARP00000110713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CER7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,902 bps, Translation length: 498 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2CER7

Version

ENSDART00000127787.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000127787.3 SPNS3-201

Summary

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Transcript: ENSDART00000127787.3 SPNS3-201

Summary

About Us

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