Transcript: ENSDART00000127379.3 cfap45-204

Description

cilia and flagella associated protein 45 [Source:ZFIN;Acc:ZDB-GENE-070209-143]

Gene Synonyms

ccdc19, fc64b08, wu:fc64b08, zgc:158569

Location

Chromosome 18: 35,173,859-35,182,693 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 8 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068103.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192545.1	cfap45-205	3668	543aa	ENSDARP00000148801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000098292.5	cfap45-201	1862	497aa	ENSDARP00000089064.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH96	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000127379.3	cfap45-204	1220	345aa	ENSDARP00000112386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RC92	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000124444.3	cfap45-202	824	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000124798.4	cfap45-203	1293	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,220 bps, Translation length: 345 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000127379.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000127379.3 cfap45-204

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Transcript: ENSDART00000127379.3 cfap45-204

Summary

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