Transcript: ENSDART00000126928.3 si:dkey-73n8.3-201

Description

si:dkey-73n8.3 [Source:ZFIN;Acc:ZDB-GENE-141219-27]

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 123 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158393.2	si:dkey-73n8.3-202	1106	296aa	ENSDARP00000139421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126928.3	si:dkey-73n8.3-201	1803	285aa	ENSDARP00000107686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5P8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172533.2	si:dkey-73n8.3-204	1285	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000167297.2	si:dkey-73n8.3-203	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,803 bps, Translation length: 285 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000126928.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.