Transcript: ENSDART00000126915.3 ubtf-202

Description

upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]

Location

About this transcript

This transcript has 13 exons, is annotated with 31 domains and features, is associated with 264 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056614.8	ubtf-201	4412	735aa	ENSDARP00000056613.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZ83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165695.2	ubtf-203	2208	735aa	ENSDARP00000131061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZ83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126915.3	ubtf-202	1536	447aa	ENSDARP00000106402.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,536 bps, Translation length: 447 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000126915.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.