Transcript: ENSDART00000126746.3 CBS-202

Description

cystathionine beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]

Gene Synonyms

zgc:110199

Location

Chromosome 1: 29,068,662-29,080,336 forward strand.

About this transcript

This transcript has 6 exons, is associated with 239 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053500.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053932.6	CBS-201	2845	571aa	ENSDARP00000053931.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JT04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192015.1	CBS-204	2253	571aa	ENSDARP00000155239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JT04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126746.3	CBS-202	794	84aa	ENSDARP00000110727.2	Nonsense mediated decay	-	-
ENSDART00000141522.2	CBS-203	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 794 bps, Translation length: 84 residues

Version

ENSDART00000126746.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000126746.3 CBS-202

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Transcript: ENSDART00000126746.3 CBS-202

Summary

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