Transcript: ENSDART00000126240.3 cd44a-201

Description

CD44 molecule (IN blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]

Location

About this transcript

This transcript has 8 exons, is annotated with 26 domains and features, is associated with 327 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126240.3	cd44a-201	1782	392aa	ENSDARP00000110970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174188.2	cd44a-202	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,782 bps, Translation length: 392 residues

Version

ENSDART00000126240.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.