Transcript: ENSDART00000126075.3 PHYHIPL-202

Description

phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]

Location

About this transcript

This transcript has 4 exons, is associated with 522 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006676.10	PHYHIPL-201	2859	375aa	ENSDARP00000003978.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A5X6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126075.3	PHYHIPL-202	1404	128aa	ENSDARP00000106844.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,404 bps, Translation length: 128 residues

Version

ENSDART00000126075.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.