Transcript: ENSDART00000125945.5 snip1-201

Description

Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]

Location

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 185 variant alleles and maps to 302 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125945.5	snip1-201	1776	374aa	ENSDARP00000108908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167240.2	snip1-202	804	261aa	ENSDARP00000130301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBM5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,776 bps, Translation length: 374 residues

Version

ENSDART00000125945.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.