Transcript: ENSDART00000125920.4 pdlim2-201

Description

PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]

Location

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 2245 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125920.4	pdlim2-201	2727	364aa	ENSDARP00000109858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AVD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155189.2	pdlim2-202	713	142aa	ENSDARP00000127944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,727 bps, Translation length: 364 residues

Version

ENSDART00000125920.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.