Transcript: ENSDART00000125857.3 SCN4B-201

Description

sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]

Gene Synonyms

sb:cb973, scn4b.2, si:ch211-139a5.5

Location

Chromosome 5: 37,933,885-37,935,621 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 388 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060319.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000084868.4	SCN4B-204	1876	232aa	ENSDARP00000079303.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06W25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185364.1	SCN4B-203	1153	232aa	ENSDARP00000154888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06W25	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125857.3	SCN4B-201	645	100aa	ENSDARP00000109051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141233.2	SCN4B-202	502	98aa	ENSDARP00000122908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 645 bps, Translation length: 100 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000125857.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000125857.3 SCN4B-201

Summary

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Transcript: ENSDART00000125857.3 SCN4B-201

Summary

About Us

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