Transcript: ENSDART00000125733.4 CHST1-202

Description

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]

Location

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features, is associated with 36 variant alleles and maps to 339 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125733.4	CHST1-202	2769	420aa	ENSDARP00000108405.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PMP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129105.3	CHST1-201	2711	420aa	ENSDARP00000105620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PMP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,769 bps, Translation length: 420 residues

Version

ENSDART00000125733.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.